Motif ID: NFY{A,B,C}.p2

Z-value: 4.376

Transcription factors associated with NFY{A,B,C}.p2:

NameEntrezDescription
Nfya 18044 nuclear transcription factor-Y alpha
Nfyb 18045 nuclear transcription factor-Y beta
Nfyc 18046 nuclear transcription factor-Y gamma

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
Nfycchr4_-_1204981980.711.6e-06Click!
Nfybchr10_-_822267740.661.3e-05Click!
Nfyachr17_-_485489730.464.9e-03Click!


Activity profile for motif NFY{A,B,C}.p2.

activity profile for motif NFY{A,B,C}.p2


Sorted Z-values histogram for motif NFY{A,B,C}.p2

Sorted Z-values for motif NFY{A,B,C}.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of NFY{A,B,C}.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Description
chr11_-_98885428 28.477 NM_011623
Top2a
topoisomerase (DNA) II alpha
chr16_-_17125198 24.790 NM_183287
2610318N02Rik
RIKEN cDNA 2610318N02 gene
chr11_-_86922163 24.113 NM_175563
Prr11
proline rich 11
chr11_+_71855939 22.641 NM_144526
Fam64a
family with sequence similarity 64, member A
chr6_+_124780226 21.802 Cdca3
cell division cycle associated 3
chr11_-_97049143 19.306 Kpnb1
karyopherin (importin) beta 1
chr16_+_38089086 18.978 NM_019827
Gsk3b
glycogen synthase kinase 3 beta
chr1_-_191511950 18.761 NM_001081363
Cenpf
centromere protein F
chr4_+_124334876 18.280 NM_011141
Pou3f1
POU domain, class 3, transcription factor 1
chr13_+_23838602 17.768 NM_175664
Hist1h2bb
histone cluster 1, H2bb
chr1_+_42752608 17.183


chr1_+_141351340 16.803 NM_009791
Aspm
asp (abnormal spindle)-like, microcephaly associated (Drosophila)
chr13_+_21879356 16.645 NM_178202
Hist1h2bp
histone cluster 1, H2bp
chr3_+_32607582 16.629 Actl6a
actin-like 6A
chr13_+_22127689 16.043 NM_175665
Hist1h2bk
histone cluster 1, H2bk
chr9_+_44142772 15.750 NM_010436
H2afx
H2A histone family, member X
chr7_-_56892061 15.552 NM_001005232
Dbx1
developing brain homeobox 1
chr13_-_23837389 15.452 NM_175653
Hist1h3c
histone cluster 1, H3c
chr5_+_124889925 15.328 NM_030241
Setd8
SET domain containing (lysine methyltransferase) 8
chr6_+_124780193 14.496 NM_013538
Cdca3
cell division cycle associated 3
chr5_+_30969259 14.143 NM_007681
Cenpa
centromere protein A
chr3_-_27052733 13.587 NM_001177625
NM_007900
Ect2

ect2 oncogene

chr1_+_193645351 13.540 NM_010892
Nek2
NIMA (never in mitosis gene a)-related expressed kinase 2
chr11_-_97049185 13.486 NM_008379
Kpnb1
karyopherin (importin) beta 1
chr4_-_118109775 13.238 NM_023223
Cdc20
cell division cycle 20 homolog (S. cerevisiae)
chr2_-_172195998 13.127 NM_011497
Aurka
aurora kinase A
chr6_-_82724366 12.980 NM_013820
Hk2
hexokinase 2
chrX_+_97972559 12.968 NM_001177780
Dlg3
discs, large homolog 3 (Drosophila)
chr13_+_23666249 12.773 NM_178188
Hist1h2ad
Hist1h2ai
histone cluster 1, H2ad
histone cluster 1, H2ai
chr4_-_41411865 12.396 NM_024241
Kif24
kinesin family member 24
chr6_-_83071206 12.340 Wbp1
WW domain binding protein 1
chr13_-_23666058 12.274 NM_178195
Hist1h2bf
histone cluster 1, H2bf
chr13_-_22127419 12.203 NM_175659
Hist1h2ah
histone cluster 1, H2ah
chr16_+_14163414 12.144 Nde1
nuclear distribution gene E homolog 1 (A nidulans)
chr11_+_68859125 12.023 NM_011496
Aurkb
aurora kinase B
chr13_+_75844950 12.012 Ell2
elongation factor RNA polymerase II 2
chr14_-_48037815 12.000 Dlgap5
discs, large (Drosophila) homolog-associated protein 5
chr10_-_80813067 11.754 NM_001163165
NM_010440
Hmg20b

high mobility group 20 B

chr3_+_96073622 11.729 NM_175666
Hist2h2bb
histone cluster 2, H2bb
chr11_-_40546863 11.625 NM_013552
Hmmr
hyaluronan mediated motility receptor (RHAMM)
chr13_-_56353523 11.617 NM_010896
Neurog1
neurogenin 1
chr16_+_52031733 11.548 Cblb
Casitas B-lineage lymphoma b
chr9_-_70269246 11.544 Ccnb2
cyclin B2
chr7_+_86805081 11.432 NM_029835
5730590G19Rik
RIKEN cDNA 5730590G19 gene
chr8_+_109127245 11.102 NM_009864
Cdh1
cadherin 1
chr8_+_86479405 11.082 NM_024184
Asf1b
ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
chr17_-_34137221 10.944 NM_001001892
H2-K1
histocompatibility 2, K1, K region
chr2_+_25227840 10.915 NM_001081085
2010317E24Rik
RIKEN cDNA 2010317E24 gene
chr13_+_51740600 10.853 NM_025415
Cks2
CDC28 protein kinase regulatory subunit 2
chr16_+_52031704 10.830 Cblb
Casitas B-lineage lymphoma b
chr4_+_132324212 10.727 NM_011284
Rpa2
replication protein A2
chr7_-_150646883 10.695 NM_001161624
NM_009876
Cdkn1c

cyclin-dependent kinase inhibitor 1C (P57)

chr3_-_89222140 10.514 NM_016904
Cks1b
CDC28 protein kinase 1b
chr15_+_98905403 10.432 NM_001162506
NM_030159
Troap

trophinin associated protein

chr10_-_128258639 10.426 NM_024180
Ormdl2
ORM1-like 2 (S. cerevisiae)
chr18_-_33373428 10.217 NM_133774
Stard4
StAR-related lipid transfer (START) domain containing 4
chr13_+_23627286 10.130 NM_145073
Hist1h3g
histone cluster 1, H3g
chr11_+_40547143 10.050 NM_026023
Nudcd2
NudC domain containing 2
chr5_-_38215607 10.035 NM_010835
Msx1
homeobox, msh-like 1
chr1_+_136859153 10.025 NM_026024
Ube2t
ubiquitin-conjugating enzyme E2T (putative)
chr10_+_79317409 9.967 Ptbp1
polypyrimidine tract binding protein 1
chr4_-_135429715 9.918 Pnrc2
proline-rich nuclear receptor coactivator 2
chr4_-_43013217 9.825 NM_009503
Vcp
valosin containing protein
chr19_-_7114388 9.750 NM_016737
Stip1
stress-induced phosphoprotein 1
chr11_+_94797565 9.541 NM_007742
Col1a1
collagen, type I, alpha 1
chr10_-_79862025 9.397 Mbd3
methyl-CpG binding domain protein 3
chr6_+_88148657 9.357 NM_008090
Gata2
GATA binding protein 2
chr16_+_14163356 9.238 NM_001114085
NM_023317
Nde1

nuclear distribution gene E homolog 1 (A nidulans)

chr11_-_97048933 9.163 Kpnb1
karyopherin (importin) beta 1
chr8_-_125842456 9.008 NM_016925
Fanca
Fanconi anemia, complementation group A
chr6_-_125141525 8.991 NM_146171
Ncapd2
non-SMC condensin I complex, subunit D2
chr9_+_83728295 8.917 NM_001110265
NM_009445
Ttk

Ttk protein kinase

chr3_+_121129396 8.869 NM_028044
Cnn3
calponin 3, acidic
chr6_+_4455686 8.737 NM_007743
Col1a2
collagen, type I, alpha 2
chr14_+_47380287 8.716 Cdkn3
cyclin-dependent kinase inhibitor 3
chr3_-_96024766 8.714 NM_175662
Hist2h2ac
histone cluster 2, H2ac
chr13_-_23854226 8.693 NM_013550
Hist1h3a
histone cluster 1, H3a
chr10_-_68815606 8.662 NM_007659
Cdk1
cyclin-dependent kinase 1
chr15_-_82074765 8.613 NM_001080158
Cenpm
centromere protein M
chr5_+_90889913 8.571 NM_009654
Alb
albumin
chr17_+_56443766 8.476 Uhrf1
ubiquitin-like, containing PHD and RING finger domains, 1
chr7_+_138703898 8.454 NM_009774
Bub3
budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
chr13_-_53568111 8.442 NM_013601
Msx2
homeobox, msh-like 2
chr11_+_54716354 8.436 NM_001083929
NM_008161
Gpx3

glutathione peroxidase 3

chr14_-_66452720 8.424 NM_028039
Esco2
establishment of cohesion 1 homolog 2 (S. cerevisiae)
chr8_+_59990639 8.407 NM_008252
Hmgb2
high mobility group box 2
chr2_+_181498036 8.338 NM_001171615
Myt1
myelin transcription factor 1
chr1_-_78193381 8.328 NM_001159520
NM_008781
Pax3

paired box gene 3

chr4_-_135429739 8.144 Pnrc2
proline-rich nuclear receptor coactivator 2
chr2_-_132078887 8.078 NM_011045
Pcna
proliferating cell nuclear antigen
chr14_+_47380215 8.077 NM_028222
Cdkn3
cyclin-dependent kinase inhibitor 3
chr18_+_56591785 8.012 NM_026240
Gramd3
GRAM domain containing 3
chr8_+_86176531 7.998 NM_018771
Gipc1
GIPC PDZ domain containing family, member 1
chr8_+_24521967 7.955 NM_013834
Sfrp1
secreted frizzled-related protein 1
chr16_-_15637390 7.950 NM_008565
Mcm4
minichromosome maintenance deficient 4 homolog (S. cerevisiae)
chr19_-_60302398 7.928 D19Ertd737e
DNA segment, Chr 19, ERATO Doi 737, expressed
chr13_+_109106530 7.898 NM_178683
Depdc1b
DEP domain containing 1B
chr18_+_34784589 7.871 NM_009004
NM_001166406
Kif20a

kinesin family member 20A

chr14_-_48037874 7.794 Dlgap5
discs, large (Drosophila) homolog-associated protein 5
chr1_-_171899278 7.754 Hsd17b7
hydroxysteroid (17-beta) dehydrogenase 7
chr13_-_23635220 7.697 NM_178197
Hist1h2bh
histone cluster 1, H2bh
chr18_-_34911152 7.611 NM_009860
Cdc25c
cell division cycle 25 homolog C (S. pombe)
chrX_-_7651846 7.543 NM_011514
Suv39h1
suppressor of variegation 3-9 homolog 1 (Drosophila)
chr9_-_70269326 7.477 NM_007630
Ccnb2
cyclin B2
chr3_+_108087046 7.448 NM_019972
Sort1
sortilin 1
chr7_-_146768633 7.438 NM_183248
Nkx6-2
NK6 homeobox 2
chrX_+_108009728 7.420 NM_008901
Pou3f4
POU domain, class 3, transcription factor 4
chr13_+_21809496 7.413 NM_178206
Hist1h3h
histone cluster 1, H3h
chr2_+_164595415 7.404 NM_026785
Ube2c
ubiquitin-conjugating enzyme E2C
chr10_+_75495391 7.337 Zfp280b
zinc finger protein 280B
chr14_-_68333666 7.295 NM_001110162
Cdca2
cell division cycle associated 2
chr4_+_114672722 7.290 NM_009185
Stil
Scl/Tal1 interrupting locus
chr13_-_21872421 7.280 NM_020034
Hist1h1b
histone cluster 1, H1b
chr15_-_83555335 7.277 NM_022723
Scube1
signal peptide, CUB domain, EGF-like 1
chr4_+_154335029 7.172 NM_010419
Hes5
hairy and enhancer of split 5 (Drosophila)
chrX_-_49967112 7.079 NM_016697
Gpc3
glypican 3
chr8_-_67212325 7.044 NM_025436
Sc4mol
sterol-C4-methyl oxidase-like
chr4_-_22415277 7.006 NM_008899
Pou3f2
POU domain, class 3, transcription factor 2
chr19_-_12869863 6.990 Zfp91
zinc finger protein 91
chr3_+_108087057 6.957 Sort1
sortilin 1
chr11_-_6344354 6.854 H2afv
H2A histone family, member V
chr10_+_79317316 6.832 NM_001077363
NM_008956
Ptbp1

polypyrimidine tract binding protein 1

chr15_-_82075137 6.741 NM_025639
NM_178269
Cenpm

centromere protein M

chr11_+_87405628 6.720 NM_133215
Mtmr4
myotubularin related protein 4
chr19_+_37450854 6.676 NM_010615
Kif11
kinesin family member 11
chr3_-_36470904 6.546 NM_009828
Ccna2
cyclin A2
chr13_-_3917356 6.539 NM_019671
Net1
neuroepithelial cell transforming gene 1
chr11_-_120434075 6.508 P4hb
prolyl 4-hydroxylase, beta polypeptide
chr2_+_91366966 6.505 Ckap5
cytoskeleton associated protein 5
chr9_-_21564723 6.494 NM_026282
Spc24
SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
chr7_-_137409721 6.433 Fgfr2
fibroblast growth factor receptor 2
chr7_+_117205194 6.394 NM_009281
Zfp143
zinc finger protein 143
chr11_+_86922732 6.287 NM_025377
Fam33a
family with sequence similarity 33, member A
chr5_+_103854200 6.278 NM_011204
Ptpn13
protein tyrosine phosphatase, non-receptor type 13
chr4_-_22415444 6.275 Pou3f2
POU domain, class 3, transcription factor 2
chr13_-_23775827 6.269 NM_178189
Hist1h2ac
histone cluster 1, H2ac
chr17_+_7374435 6.215 NM_011299
Rps6ka2
ribosomal protein S6 kinase, polypeptide 2
chr1_-_93309713 6.205 NM_019479
Hes6
hairy and enhancer of split 6 (Drosophila)
chr2_-_127657532 6.150 NM_001113179
NM_009772
Bub1

budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae)

chr11_+_116295502 6.141 Fam100b
family with sequence similarity 100, member B
chr5_+_34001199 6.129 Tacc3
transforming, acidic coiled-coil containing protein 3
chr2_+_131012677 6.119 NM_001111075
NM_023117
Cdc25b

cell division cycle 25 homolog B (S. pombe)

chr10_-_128142007 6.101 NM_016756
NM_183417
Cdk2

cyclin-dependent kinase 2

chr8_-_4325051 6.100 NM_010485
Elavl1
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)
chr11_-_120434181 6.067 P4hb
prolyl 4-hydroxylase, beta polypeptide
chr4_-_124614072 6.056 NM_026560
Cdca8
cell division cycle associated 8
chr2_-_154395469 6.055 NM_007891
E2f1
E2F transcription factor 1
chr2_+_164595389 6.051 Ube2c
ubiquitin-conjugating enzyme E2C
chr6_-_87800966 6.041 NM_001109745
NM_001109746
NM_013493
Cnbp


cellular nucleic acid binding protein


chr9_-_107537602 6.028 NM_008138
Gnai2
guanine nucleotide binding protein (G protein), alpha inhibiting 2
chr2_-_129122892 6.017 NM_181589
Ckap2l
cytoskeleton associated protein 2-like
chr9_-_61794540 6.017 NM_024245
Kif23
kinesin family member 23
chr2_+_152673699 5.955 NM_001141975
NM_001141976
NM_001141977
NM_001141978
NM_028109
Tpx2




TPX2, microtubule-associated protein homolog (Xenopus laevis)




chr3_-_68848588 5.943 Trim59
tripartite motif-containing 59
chr15_-_78004452 5.939 NM_025931
Ift27
intraflagellar transport 27 homolog (Chlamydomonas)
chr16_+_37539964 5.920 NM_001042499
Rabl3
RAB, member of RAS oncogene family-like 3
chr6_+_29644178 5.851 NM_146173
Tspan33
tetraspanin 33
chr11_-_97490978 5.803 NM_175332
E130012A19Rik
RIKEN cDNA E130012A19 gene
chr1_-_135975681 5.799 NM_007570
Btg2
B-cell translocation gene 2, anti-proliferative
chr3_-_36470882 5.796 Ccna2
cyclin A2
chr6_-_47763309 5.796 Pdia4
protein disulfide isomerase associated 4
chr2_+_119444452 5.764 Nusap1
nucleolar and spindle associated protein 1
chr8_+_73118329 5.730 NM_023627
Isyna1
myo-inositol 1-phosphate synthase A1
chr10_+_79451369 5.684 Cnn2
calponin 2
chr2_+_164595447 5.669 Ube2c
ubiquitin-conjugating enzyme E2C
chr12_+_78339071 5.655 Fut8
fucosyltransferase 8
chr13_+_51942043 5.629 NM_011817
Gadd45g
growth arrest and DNA-damage-inducible 45 gamma
chr4_+_47366162 5.609 NM_009370
Tgfbr1
transforming growth factor, beta receptor I
chr11_+_102465839 5.608 Fzd2
frizzled homolog 2 (Drosophila)
chr3_-_36470845 5.608 Ccna2
cyclin A2
chr13_+_23646900 5.575 NM_145713
Hist1h1d
histone cluster 1, H1d
chr17_-_25097542 5.529 NM_198937
Hn1l
hematological and neurological expressed 1-like
chr14_+_20570444 5.515 NM_008695
Nid2
nidogen 2
chr13_-_105018845 5.497 NM_172807
Ppwd1
peptidylprolyl isomerase domain and WD repeat containing 1
chr1_+_58052814 5.493 NM_199007
Sgol2
shugoshin-like 2 (S. pombe)
chr13_+_23842956 5.493 NM_175660
Hist1h2ab
histone cluster 1, H2ab
chr15_-_99481964 5.489 NM_012025
Racgap1
Rac GTPase-activating protein 1
chr3_+_95733186 5.481 Anp32e
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr2_+_167363696 5.464 NM_011427
Snai1
snail homolog 1 (Drosophila)
chr2_-_143836838 5.459 NM_024281
NM_133626
Rrbp1

ribosome binding protein 1

chr13_-_23790310 5.446 NM_178208
Hist1h4c
histone cluster 1, H4c
chr2_-_168592528 5.436 NM_175303
NM_201395
NM_201396
Sall4


sal-like 4 (Drosophila)


chr9_-_111174027 5.436 Mlh1
mutL homolog 1 (E. coli)
chr3_+_133899454 5.428 Cxxc4
CXXC finger 4
chr17_+_56443710 5.405 NM_001111078
NM_001111080
Uhrf1

ubiquitin-like, containing PHD and RING finger domains, 1

chr2_+_152561983 5.402 NM_010495
Id1
inhibitor of DNA binding 1
chrX_+_97821403 5.401 NM_008446
Kif4
kinesin family member 4
chr12_-_101121613 5.393 NM_030172
2610021K21Rik
RIKEN cDNA 2610021K21 gene
chr11_+_102465684 5.383 NM_020510
Fzd2
frizzled homolog 2 (Drosophila)
chrX_-_99352341 5.372 NM_146235
Ercc6l
excision repair cross-complementing rodent repair deficiency complementation group 6 - like
chr11_-_68787314 5.369 NM_001101644
NM_021329
Gm4535
Rangrf
predicted gene 4535
RAN guanine nucleotide release factor
chr11_-_96777696 5.341 NM_030248
Cdk5rap3
CDK5 regulatory subunit associated protein 3
chr9_+_37015872 5.337 NM_025464
Tmem218
transmembrane protein 218
chr11_-_102786403 5.329 Kif18b
kinesin family member 18B
chr11_-_106021399 5.315 NM_172397
Limd2
LIM domain containing 2
chr2_+_91105271 5.307 NM_001166024
NM_023854
Arfgap2

ADP-ribosylation factor GTPase activating protein 2

chr1_-_171899306 5.306 NM_010476
Hsd17b7
hydroxysteroid (17-beta) dehydrogenase 7
chr6_+_128313041 5.306 Foxm1
forkhead box M1
chr7_+_129302998 5.306 Plk1
polo-like kinase 1 (Drosophila)
chr8_+_32222291 5.271 NM_175136
Rnf122
ring finger protein 122

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment p-value GO term description
3.68 9.82e-39 GO:0007049 cell cycle
3.93 6.10e-32 GO:0022402 cell cycle process
1.60 7.69e-31 GO:0044237 cellular metabolic process
4.38 9.70e-30 GO:0022403 cell cycle phase
4.86 2.09e-29 GO:0000279 M phase
1.73 1.75e-28 GO:0044260 cellular macromolecule metabolic process
1.88 1.13e-27 GO:0034641 cellular nitrogen compound metabolic process
4.73 2.29e-27 GO:0051301 cell division
2.04 3.80e-27 GO:0090304 nucleic acid metabolic process
1.56 4.35e-27 GO:0044238 primary metabolic process
1.92 1.39e-26 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.49 2.12e-26 GO:0008152 metabolic process
1.84 2.48e-26 GO:0006807 nitrogen compound metabolic process
1.64 2.83e-25 GO:0043170 macromolecule metabolic process
5.47 9.79e-25 GO:0000087 M phase of mitotic cell cycle
1.88 4.96e-24 GO:0009058 biosynthetic process
5.40 1.48e-23 GO:0000280 nuclear division
5.40 1.48e-23 GO:0007067 mitosis
4.11 7.54e-23 GO:0000278 mitotic cell cycle
5.19 1.44e-22 GO:0048285 organelle fission
1.86 2.14e-22 GO:0044249 cellular biosynthetic process
2.40 3.07e-22 GO:0006996 organelle organization
2.00 3.80e-20 GO:0071841 cellular component organization or biogenesis at cellular level
2.02 1.83e-19 GO:0071842 cellular component organization at cellular level
1.79 6.02e-18 GO:0071840 cellular component organization or biogenesis
1.89 1.16e-17 GO:0009059 macromolecule biosynthetic process
1.89 2.15e-17 GO:0034645 cellular macromolecule biosynthetic process
1.80 3.80e-17 GO:0016043 cellular component organization
1.69 2.38e-16 GO:0060255 regulation of macromolecule metabolic process
3.24 2.47e-16 GO:0006259 DNA metabolic process
1.24 3.05e-16 GO:0009987 cellular process
1.62 3.61e-16 GO:0019222 regulation of metabolic process
1.66 1.71e-15 GO:0080090 regulation of primary metabolic process
1.65 2.32e-15 GO:0031323 regulation of cellular metabolic process
1.78 2.46e-15 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3.15 2.55e-15 GO:0051276 chromosome organization
1.84 7.14e-15 GO:0016070 RNA metabolic process
1.76 8.60e-15 GO:0051171 regulation of nitrogen compound metabolic process
1.83 2.19e-14 GO:0006355 regulation of transcription, DNA-dependent
1.78 2.37e-14 GO:0010467 gene expression
1.78 3.06e-14 GO:2000112 regulation of cellular macromolecule biosynthetic process
1.81 4.10e-14 GO:0051252 regulation of RNA metabolic process
1.75 5.30e-14 GO:0010468 regulation of gene expression
2.73 7.62e-14 GO:0033554 cellular response to stress
1.76 1.13e-13 GO:0010556 regulation of macromolecule biosynthetic process
5.99 1.66e-13 GO:0071103 DNA conformation change
3.26 3.10e-13 GO:0006974 response to DNA damage stimulus
1.69 3.29e-12 GO:0009889 regulation of biosynthetic process
1.68 6.36e-12 GO:0031326 regulation of cellular biosynthetic process
1.88 2.45e-11 GO:0032774 RNA biosynthetic process
4.64 3.48e-11 GO:0006260 DNA replication
1.87 4.54e-11 GO:0006351 transcription, DNA-dependent
6.10 8.27e-11 GO:0006323 DNA packaging
3.45 1.03e-10 GO:0006281 DNA repair
5.30 1.18e-09 GO:0007059 chromosome segregation
2.96 2.97e-09 GO:0006325 chromatin organization
2.72 5.33e-09 GO:0051726 regulation of cell cycle
6.69 1.07e-08 GO:0071824 protein-DNA complex subunit organization
3.59 1.31e-08 GO:0010564 regulation of cell cycle process
6.92 1.84e-08 GO:0031497 chromatin assembly
7.35 2.05e-08 GO:0006334 nucleosome assembly
6.48 2.11e-08 GO:0006333 chromatin assembly or disassembly
6.80 2.63e-08 GO:0034728 nucleosome organization
1.67 2.95e-08 GO:0048523 negative regulation of cellular process
6.68 3.73e-08 GO:0065004 protein-DNA complex assembly
4.60 1.32e-06 GO:0071156 regulation of cell cycle arrest
4.56 1.62e-06 GO:0006310 DNA recombination
4.51 1.99e-06 GO:0007126 meiosis
4.51 1.99e-06 GO:0051327 M phase of meiotic cell cycle
4.47 2.43e-06 GO:0051321 meiotic cell cycle
8.29 2.80e-06 GO:0016126 sterol biosynthetic process
4.71 4.69e-06 GO:0000075 cell cycle checkpoint
1.48 6.88e-06 GO:0007275 multicellular organismal development
1.54 1.04e-05 GO:0048519 negative regulation of biological process
1.65 1.09e-05 GO:0048513 organ development
2.01 1.19e-05 GO:0009790 embryo development
1.91 1.20e-05 GO:0006357 regulation of transcription from RNA polymerase II promoter
1.53 1.45e-05 GO:0048731 system development
1.44 2.02e-05 GO:0032502 developmental process
6.00 2.72e-05 GO:0031570 DNA integrity checkpoint
1.55 2.94e-05 GO:0044267 cellular protein metabolic process
2.07 3.02e-05 GO:0051172 negative regulation of nitrogen compound metabolic process
8.63 3.21e-05 GO:0006695 cholesterol biosynthetic process
2.07 3.86e-05 GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.48 5.05e-05 GO:0048856 anatomical structure development
2.10 6.70e-05 GO:0043933 macromolecular complex subunit organization
6.08 6.97e-05 GO:0000077 DNA damage checkpoint
1.49 7.60e-05 GO:0048522 positive regulation of cellular process
1.85 7.86e-05 GO:0031324 negative regulation of cellular metabolic process
2.61 9.50e-05 GO:0034621 cellular macromolecular complex subunit organization
2.31 1.44e-04 GO:0007417 central nervous system development
1.71 1.55e-04 GO:0010604 positive regulation of macromolecule metabolic process
14.28 1.55e-04 GO:0006270 DNA-dependent DNA replication initiation
8.50 1.77e-04 GO:0031576 G2/M transition checkpoint
1.78 1.99e-04 GO:0009892 negative regulation of metabolic process
1.89 2.58e-04 GO:0010628 positive regulation of gene expression
1.43 3.61e-04 GO:0048518 positive regulation of biological process
5.77 4.32e-04 GO:0006261 DNA-dependent DNA replication
2.06 5.90e-04 GO:0065003 macromolecular complex assembly
1.63 7.26e-04 GO:0009893 positive regulation of metabolic process
1.78 7.66e-04 GO:0010605 negative regulation of macromolecule metabolic process
2.57 9.94e-04 GO:0034622 cellular macromolecular complex assembly
1.88 1.04e-03 GO:0009890 negative regulation of biosynthetic process
1.57 1.11e-03 GO:0044281 small molecule metabolic process
2.10 1.30e-03 GO:0009792 embryo development ending in birth or egg hatching
1.90 1.30e-03 GO:0010558 negative regulation of macromolecule biosynthetic process
1.42 1.38e-03 GO:0019538 protein metabolic process
1.92 1.47e-03 GO:2000113 negative regulation of cellular macromolecule biosynthetic process
1.87 1.47e-03 GO:0051254 positive regulation of RNA metabolic process
6.24 1.59e-03 GO:0000819 sister chromatid segregation
1.80 1.82e-03 GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.87 1.95e-03 GO:0031327 negative regulation of cellular biosynthetic process
2.09 1.98e-03 GO:0043009 chordate embryonic development
1.97 2.01e-03 GO:0051253 negative regulation of RNA metabolic process
1.56 2.01e-03 GO:0006950 response to stress
3.99 2.02e-03 GO:0016125 sterol metabolic process
2.35 2.08e-03 GO:0007420 brain development
2.98 2.14e-03 GO:0045165 cell fate commitment
1.74 2.18e-03 GO:0044085 cellular component biogenesis
1.63 2.32e-03 GO:0031325 positive regulation of cellular metabolic process
4.13 2.54e-03 GO:0006694 steroid biosynthetic process
1.96 2.69e-03 GO:0045892 negative regulation of transcription, DNA-dependent
2.62 3.20e-03 GO:0007017 microtubule-based process
1.66 3.29e-03 GO:0007399 nervous system development
8.59 3.34e-03 GO:0031572 G2/M transition DNA damage checkpoint
1.84 3.65e-03 GO:0045893 positive regulation of transcription, DNA-dependent
5.21 4.23e-03 GO:0000910 cytokinesis
1.76 4.57e-03 GO:0051173 positive regulation of nitrogen compound metabolic process
2.02 5.09e-03 GO:0072358 cardiovascular system development
2.02 5.09e-03 GO:0072359 circulatory system development
6.18 5.57e-03 GO:0000070 mitotic sister chromatid segregation
2.30 6.41e-03 GO:0016568 chromatin modification
1.62 8.88e-03 GO:0050790 regulation of catalytic activity
2.40 9.42e-03 GO:0007507 heart development
6.33 1.43e-02 GO:0001837 epithelial to mesenchymal transition
3.83 1.50e-02 GO:0008203 cholesterol metabolic process
1.72 1.61e-02 GO:0022607 cellular component assembly
2.88 1.71e-02 GO:0000226 microtubule cytoskeleton organization
2.04 1.72e-02 GO:0007010 cytoskeleton organization
1.66 1.74e-02 GO:0051641 cellular localization
2.05 1.94e-02 GO:0048598 embryonic morphogenesis
2.64 1.96e-02 GO:0033365 protein localization to organelle
1.86 2.10e-02 GO:0009887 organ morphogenesis
1.73 2.11e-02 GO:0022008 neurogenesis
1.48 2.24e-02 GO:0043412 macromolecule modification
3.37 2.24e-02 GO:0051325 interphase
4.15 2.46e-02 GO:0006302 double-strand break repair
4.45 2.47e-02 GO:0048663 neuron fate commitment
3.47 2.72e-02 GO:0034504 protein localization to nucleus
1.49 2.73e-02 GO:0006464 protein modification process
1.80 3.02e-02 GO:0010629 negative regulation of gene expression
2.45 3.62e-02 GO:0035239 tube morphogenesis
2.18 3.82e-02 GO:0008283 cell proliferation
1.68 4.00e-02 GO:0010557 positive regulation of macromolecule biosynthetic process
2.05 4.24e-02 GO:0060284 regulation of cell development
2.30 4.26e-02 GO:0008380 RNA splicing
5.57 4.62e-02 GO:0008630 DNA damage response, signal transduction resulting in induction of apoptosis
2.46 4.89e-02 GO:0030900 forebrain development
3.90 4.90e-02 GO:0010212 response to ionizing radiation

Gene overrepresentation in compartment category:

enrichment p-value GO term description
1.51 1.57e-62 GO:0044424 intracellular part
1.50 2.50e-62 GO:0005622 intracellular
2.01 1.50e-60 GO:0005634 nucleus
1.65 2.93e-57 GO:0043231 intracellular membrane-bounded organelle
1.64 7.00e-57 GO:0043227 membrane-bounded organelle
1.57 7.22e-55 GO:0043229 intracellular organelle
1.56 2.62e-54 GO:0043226 organelle
1.91 1.11e-37 GO:0044446 intracellular organelle part
1.89 5.69e-37 GO:0044422 organelle part
2.39 1.29e-29 GO:0044428 nuclear part
2.37 1.51e-27 GO:0031974 membrane-enclosed lumen
2.38 2.14e-27 GO:0070013 intracellular organelle lumen
2.38 2.72e-27 GO:0043233 organelle lumen
2.49 6.31e-27 GO:0031981 nuclear lumen
4.00 9.13e-27 GO:0005694 chromosome
4.03 4.76e-25 GO:0044427 chromosomal part
2.70 6.82e-23 GO:0005654 nucleoplasm
1.77 9.17e-21 GO:0032991 macromolecular complex
1.38 3.95e-19 GO:0005737 cytoplasm
1.87 9.05e-18 GO:0043228 non-membrane-bounded organelle
1.87 9.05e-18 GO:0043232 intracellular non-membrane-bounded organelle
1.16 7.78e-16 GO:0005623 cell
1.16 7.78e-16 GO:0044464 cell part
1.73 6.01e-15 GO:0043234 protein complex
5.92 1.06e-12 GO:0000793 condensed chromosome
2.73 1.07e-12 GO:0015630 microtubule cytoskeleton
4.84 2.11e-11 GO:0000775 chromosome, centromeric region
3.69 8.45e-10 GO:0000785 chromatin
3.65 2.40e-09 GO:0000228 nuclear chromosome
6.36 1.60e-08 GO:0000794 condensed nuclear chromosome
3.72 1.90e-08 GO:0044454 nuclear chromosome part
6.94 3.51e-08 GO:0030496 midbody
4.51 5.80e-08 GO:0005819 spindle
1.34 7.09e-08 GO:0044444 cytoplasmic part
5.23 2.43e-07 GO:0032993 protein-DNA complex
4.98 2.43e-07 GO:0000776 kinetochore
6.66 2.49e-07 GO:0000786 nucleosome
1.67 1.28e-05 GO:0005829 cytosol
3.06 1.58e-05 GO:0005813 centrosome
7.48 2.99e-05 GO:0000779 condensed chromosome, centromeric region
1.63 7.45e-05 GO:0005856 cytoskeleton
2.77 1.48e-04 GO:0005815 microtubule organizing center
1.94 1.53e-04 GO:0044451 nucleoplasm part
10.99 3.08e-04 GO:0000780 condensed nuclear chromosome, centromeric region
1.76 3.09e-04 GO:0044430 cytoskeletal part
2.36 8.16e-04 GO:0044432 endoplasmic reticulum part
2.38 1.87e-03 GO:0042175 nuclear membrane-endoplasmic reticulum network
2.41 2.01e-03 GO:0005789 endoplasmic reticulum membrane
2.32 5.81e-03 GO:0005874 microtubule
7.52 6.97e-03 GO:0045120 pronucleus
5.57 7.30e-03 GO:0005793 ER-Golgi intermediate compartment
4.98 7.46e-03 GO:0000922 spindle pole
16.32 9.65e-03 GO:0042555 MCM complex
11.34 1.05e-02 GO:0035098 ESC/E(Z) complex
1.68 1.30e-02 GO:0012505 endomembrane system
5.10 4.15e-02 GO:0008287 protein serine/threonine phosphatase complex
3.74 4.87e-02 GO:0034399 nuclear periphery

Gene overrepresentation in function category:

enrichment p-value GO term description
1.31 6.69e-22 GO:0005488 binding
1.92 3.25e-21 GO:0003676 nucleic acid binding
2.13 3.74e-20 GO:0003677 DNA binding
1.34 2.77e-08 GO:0005515 protein binding
1.62 9.76e-08 GO:0000166 nucleotide binding
3.32 5.92e-07 GO:0003682 chromatin binding
1.33 1.63e-06 GO:0003824 catalytic activity
1.93 3.13e-06 GO:0030528 transcription regulator activity
1.68 1.71e-05 GO:0005524 ATP binding
1.66 2.41e-05 GO:0032559 adenyl ribonucleotide binding
1.65 3.14e-05 GO:0030554 adenyl nucleotide binding
1.57 6.92e-05 GO:0035639 purine ribonucleoside triphosphate binding
2.97 6.98e-05 GO:0043566 structure-specific DNA binding
1.55 1.23e-04 GO:0032555 purine ribonucleotide binding
1.55 1.27e-04 GO:0032553 ribonucleotide binding
1.55 1.54e-04 GO:0017076 purine nucleotide binding
1.84 1.29e-03 GO:0003723 RNA binding
1.91 1.44e-03 GO:0017111 nucleoside-triphosphatase activity
9.52 1.47e-03 GO:0000217 DNA secondary structure binding
4.90 1.88e-03 GO:0003697 single-stranded DNA binding
1.81 6.11e-03 GO:0016462 pyrophosphatase activity
1.81 7.01e-03 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
1.80 7.34e-03 GO:0016817 hydrolase activity, acting on acid anhydrides
3.01 1.33e-02 GO:0016853 isomerase activity
11.34 1.46e-02 GO:0030983 mismatched DNA binding
3.54 3.17e-02 GO:0042393 histone binding
1.67 3.28e-02 GO:0001071 nucleic acid binding transcription factor activity
1.67 3.28e-02 GO:0003700 sequence-specific DNA binding transcription factor activity
2.63 3.51e-02 GO:0004721 phosphoprotein phosphatase activity
13.60 3.88e-02 GO:0000400 four-way junction DNA binding
1.61 4.93e-02 GO:0019899 enzyme binding